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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945368.1_cds_XP_016487886.1_78577
CDS Infomation

[gene=LOC107807945] [db_xref=GeneID:107807945] [protein=sodium/hydrogen exchanger 8-like] [protein_id=XP_016487886.1] [location=join(124010..124214,125359..125409,125541..125632,126366..126443,126510..126667,126877..126978,127057..127174,127680..127732,127815..127877,130386..130430,131329..131384,132589..132773,133542..133589,133755..133862,134608..134830,135589..135885,136206..136303,136491..136622,136719..136937,137048..137254,137552..137819,138305..138384)] [gbkey=CDS]
Sequence

ATGGCGAGTGTGGAGGAAGGTCCATTGCCATATAATTTATGGGAAGGGGAGAAGAGCAGC
TCGTCGAATTCGAATCCAACAGATGCAGTTATATTTGCAGGAATCAGTATGTTAATAGGA
GTTTCATGCAGAACTCTCCTTCGCCGTACTTCTGTTCCTTACACTGTCGTTTTGCTCATC
ATTGGCACCGCCCTCGGCTCTCTCGAATTTGGGAGTAATTATCCACTGGGAAAGCTTGGG
AATGGAATTCGAATATGGGCAGATATAGATGCAGATCTTCTATTAGCTGTATTCCTCCCT
ATACTGATTTTTGAAGGCGCATTCTCCATGGAGGTGCACCAAATAAAGAAATGTATGGCG
CAAATGCTTTTGCTTGCTGGTCCTGGTGTACTGATTTCAACAGTTCTGATCGGTGCTGCT
GTGAAGCTTGCTTTTCCATATGACTGGAATTGGAAAACATCATTATTGTTGGGGGCGATT
CTTAGTGCTACTGATCCTGTGGCTGTTGTCGCGTTGCTTAAAGATCTGGGAGCTAGTAAA
AAGTTGAGCACAATTGTTGAAGGAGAATCTATGATGAATGATGGGGCAGCTATTGTGGTT
TACCAGCTTTTCTATCGAATGGTTCTTGGGAAAAGCTCTGGCTGGGTTGCAGTGCTGGAA
TATCTTGCAGAAGGCTCACTTGGAGCTGTCATCATCGGACTTGTGTTTGGAATGGCATCT
CTTTTCTGGCTTCGGTTTGTATACAATGATACATTGATAGACTTTTCATTGGCTCTTACC
GTGAGCTACATTGCTTACTACACAGCTCAAGAGCAAGCTGAAGCTTCTGGTATCTTGACT
CTTGTAGCACTAGGGATGGTTTTTGCAATGTCAAAGGATACCCATAGAGCTGGTGGAAAG
CAGAGCTTGCATGAGTTTTGGGAAATGATTGCCTACATTGCGAATACTTTAATATTCATC
TTGAGCGGAGTTATCATAGCTCAAAGCATCTTCAGTATTGGAAATTTTGACGACAATGCA
GGGAGATCTTGGGGCTATATCTTTCTTCTCTACATCATTCTTCAAGTGTCTCGAGCCATC
GTTGTTTTTGTGTTTTATCCTGCCCTTCGCTACTTTGGTTATGGTTTGAATTGGAAAGAA
GCTACCGTTGTCATATGGTCTGGTTTGAGAGGAGCTGTCGGTTTGGCACTCTCCTTATCT
GTTAAAGGTGCTAGTGGCGATCCAAAGTATCTCAGTGCAGAAACTGGAGCTATGTTTGTT
TTCCTTACTGGTGGAAGTGTGTTACTGACACTCATTATCAATGGATCTACTGCACAATTA
CTTCTTAGTCTCTTTGGTATGGACGCTCTATCAAAAAGTGAGGAAAACATGGTCAATTAT
GCAAAGCATCAACTATTGAGAAAGGCTGAAGAGTTTTCTAGAATCTGTAGTGGAAGCAAT
AATCCTTTCGATTGGATCACTGTTGGAGGTTATGCGACATGCATAAAGGATGTCTGTGAA
GACACAGTTTGGCCTCCCTGTACCACCAACAATAGATATCTAGATATAGATGATATGAAG
ACTATGAGAGTGTGCTTTCTGAAAGCTACTCGTGAGGCTTACTGGTCAACATTCAATGAG
GGGGGGATAACTGAATCCATTATAAGTGTTTTGATGGAATCAGTGGATGAGGCAATCGAT
CTGGCTACTCAGGGATTGCATGACTGGAAATACATTTCTACTCGCCTCAAGTTTCCAGGA
TATTGTAAATTTTTCACAAATGTTTGCCCTCCGAGGCTGACAAGGTGGTTTGTGCTAAAG
AAATTACAGGATAGTTGTCATATATGCTCTGCATTTATCCATGCTCACAGAATCGCAAGA
CAGCTTCTTCTTGACTATACTGGTGACAATGGAAATGCTGCAATTGTTATTGCTGAAAGT
GAAGCCGAAGAACTAGAGGCAAGGAAGTTTCTAGAATCTGTCAAGAATTCAATGCCCGAG
ATCTTACATCAAGCGGAATCAAGGCAAGTTACATTTTCAATGCTGAAGTGTCTGGATGAA
TGTCTCAATGATATGGAGAAAGAAGGGATTTTAACTGAGAAAGTTGTGCTGCATATACAT
GATTTGCTTCAGAATGACCTTGAAAAGCTCTCGAGAAGTCCTCCTTCAGTAAGGATCCCA
AAGCTAGGAGATGTCATAAGTATCCATCCTTTGTTTTTAAACCTTTCTCCTGCTATTCGA
AGTGATCTGGAACGCTCCTCGAAGGTTATATTGAAGACACCAGGTTGTACACTCTACACG
AAGGGTTCCAATCCGACGAGTGTCTGGCTGATAGGAAATGGATCAGTTACGTCGAAAAGG
AGCCCGTTTCCTATTCATTGTCCTGTAGATTCAACATATCCTCGAGGAAGTATTTTAGGT
CTATATGAGGCTCTTGTCGGAAAGCCATATTTGTGTGATATGGTGACAAATTCTGTGGCT
CTCTGCGTCAAAATTAAGCTGGAGTCAATCATTTCACTACTGGCCCACGGCAATGGAGAG
GAAGAATTGTTATGGAAGGAGTGCACCATTGCTGTTGCTAAGCTCTTGGCGCCTGATATG
TTCAAGAAATTCTCAATGCAAGAAGTAAGAGGCATTGTTGATGAAAGATCAGTGATGAAT
ACTTTCTCAAGTCAAGAAATAATAGAAACTTCTCATCATTCCATCAACTTCCTGTTAAGC
GGTTGCTTGAGAGATCAAACTACCGAGCAACTAATTGAATGCCCAGCAATATTGCCATGT
TCCATTTTGAATGAAAGCGTCCCTTCTGCCCGCGCCAACGTAATGGGTGAGAGTGCTGGA
TCATATTCAAAGTACAAAGGTGTAAAAGAAGCAAGGATAGTTCGTGTAGACAACATTTCA
GTATGA

Peptide Sequence

PEP ID

XP_016487886.1
PEP Infomation

PREDICTED: sodium/hydrogen exchanger 8-like [Nicotiana tabacum]
Sequence

MASVEEGPLPYNLWEGEKSSSSNSNPTDAVIFAGISMLIGVSCRTLLRRTSVPYTVVLLI
IGTALGSLEFGSNYPLGKLGNGIRIWADIDADLLLAVFLPILIFEGAFSMEVHQIKKCMA
QMLLLAGPGVLISTVLIGAAVKLAFPYDWNWKTSLLLGAILSATDPVAVVALLKDLGASK
KLSTIVEGESMMNDGAAIVVYQLFYRMVLGKSSGWVAVLEYLAEGSLGAVIIGLVFGMAS
LFWLRFVYNDTLIDFSLALTVSYIAYYTAQEQAEASGILTLVALGMVFAMSKDTHRAGGK
QSLHEFWEMIAYIANTLIFILSGVIIAQSIFSIGNFDDNAGRSWGYIFLLYIILQVSRAI
VVFVFYPALRYFGYGLNWKEATVVIWSGLRGAVGLALSLSVKGASGDPKYLSAETGAMFV
FLTGGSVLLTLIINGSTAQLLLSLFGMDALSKSEENMVNYAKHQLLRKAEEFSRICSGSN
NPFDWITVGGYATCIKDVCEDTVWPPCTTNNRYLDIDDMKTMRVCFLKATREAYWSTFNE
GGITESIISVLMESVDEAIDLATQGLHDWKYISTRLKFPGYCKFFTNVCPPRLTRWFVLK
KLQDSCHICSAFIHAHRIARQLLLDYTGDNGNAAIVIAESEAEELEARKFLESVKNSMPE
ILHQAESRQVTFSMLKCLDECLNDMEKEGILTEKVVLHIHDLLQNDLEKLSRSPPSVRIP
KLGDVISIHPLFLNLSPAIRSDLERSSKVILKTPGCTLYTKGSNPTSVWLIGNGSVTSKR
SPFPIHCPVDSTYPRGSILGLYEALVGKPYLCDMVTNSVALCVKIKLESIISLLAHGNGE
EELLWKECTIAVAKLLAPDMFKKFSMQEVRGIVDERSVMNTFSSQEIIETSHHSINFLLS
GCLRDQTTEQLIECPAILPCSILNESVPSARANVMGESAGSYSKYKGVKEARIVRVDNIS
V

Transcript Sequence

Gene sequence data has not been registered.